Introduction to the Giotto package

Ruben Dries & Jiaji George Chen

August 5th 2024

Presentation

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Ecosystem

Giotto Suite is a modular ecosystem of individual R packages that each provide different functionality and that together provide users with a fully integrated spatial multi-omics workflow.

Each package also has its own website:
- GiottoUtils: https://drieslab.github.io/GiottoUtils/
- GiottoClass: https://drieslab.github.io/GiottoClass/
- GiottoData: https://drieslab.github.io/GiottoData/
- GiottoVisuals: https://drieslab.github.io/GiottoVisuals/

More information is available at https://drieslab.github.io/Giotto_website/articles/ecosystem.html

Installation + python environment

Giotto instructions